First detection of a human astrovirus type 8 in a child with diarrhea in Belém, Brazil: comparison with other strains worldwide and identification of possible three lineages.

نویسندگان

  • Yvone B Gabbay
  • Alexandre C Linhares
  • Darleise S Oliveira
  • Lilian S Nakamura
  • Joana D'Arc P Mascarenhas
  • Rosa Helena P Gusmão
  • Marcos B Heinemann
  • Olinda Macêdo
  • José Paulo G Leite
چکیده

This study describes the genetic relationships of the first human astrovirus type-8 (HAstV-8) detected in Belém-Brazil, during a public hospital-based study. This strain was compared with other HAstV-8 strains identified elsewhere which have sequences available at GeneBank. The regions ORF1a (primers Mon348/Mon340) and ORF2 (primers Mon269/Mon270) were analyzed by nucleotide sequencing and a high similarity rate was observed among the Belém strain and other HAstV-8 strains. In ORF1a, homology values of 93-100% were detected, and in ORF2 96-99%. Considering the sequence variation (7%) observed in ORF2 region, it was suggested that HAstV-8 strains could be divided in three different lineages.

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عنوان ژورنال:
  • Memorias do Instituto Oswaldo Cruz

دوره 102 4  شماره 

صفحات  -

تاریخ انتشار 2007